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Microbial
Iron Reduction by Shewanella species
Microbial
Fe(III)-reduction has only recently been recognized and yet is now
considered a predominant form of microbial respiration. Geological
studies of Precambrian Banded Iron Formations (BIFs) have suggested
that the oxidation of organic matter coupled to the reduction of
the ferric (Fe(III)) iron was one of the first significant biological
processes for the complete oxidation of organic carbon back to carbon
dioxide. The broad taxonomic diversity of the few known Fe(III)-reducing
bacteria supports the proposal that this form of metabolism may
have evolved early in the Earth's history. In contemporary environments
microbial reduction of Fe(III) remains one of the most important
chemical changes that occurs in the development of modern anaerobic
soils and sediments, and plays an important role in the cycling
of trace metals and nutrients in anaerobic aquatic environments.
My
research interests are in the study of microbial Fe(III) reduction
in soils and sediments by the metal-reducing bacteria Shewanella.
This ubiquitous aquatic bacteria can use iron and a variety of other
metals as an electron acceptor under anaerobic conditions. This
ability makes Shewanella species potential major players
in bioremediation of a variety of environments. In addition, when
attached to a solid surface, Shewanella produces a layer
of hydrated polymers called extracellular polymeric substances (EPS).
This creates microenvironments which allows for anaerobic growth
even in the presence of oxygen. The can lead to biofouling and biocorrosion
of industrial pipes. We are looking at what happens to Shewanella's
ability to perform metal reduction when it is unable to produce
EPS.

Studies of Tube
worm normal flora
Studies of biocement
production by the tube worms Pectinaria gouldii and Phragmatopoma
lapidosa are being conducted by Dr.
Maria Dean in the Coe Department of Chemistry. During these
studies, it was noticed on scanning electron micrographs that there
were microorganisms living on the surface of these two species of
tube worms. We have been using classic microbiological and molecular
techniques to classify and identify these worm-associated microorganisms.
Future studies will look at the purpose of this relationship between
the worms and their flora.

Development of
antibacterial glass
In collaboration with
Dr. Mario
Affatigato in the Coe Department of Physics, we have been working
to develop glass that resists the colonization and growth of potentially
pathogenic microorganisms. Studies have focused on synthesizing
glass of different components that, when exposed to aqueous environments,
inhibit the growth of E. coli, Salmonella, and
other potentially pathogenic microorganisms such as Staphylococcus
aureus.
Studies of the Squid
Symbiont Shewanella pealeana
As part of the 1996 Microbial
Diversity Course associated with the Marine Biological Laboratories
at Woods Hole Oceanographic Institute, analysis of the microbial
community of the accessory nidamental gland (ANG) of the Atlantic
squid Loligo pealei was begun. The ANG is associated
with the reproductive system of the squid, but its function is unclear.
When the squid is sexually mature, the ANG is teaming with a diverse
community of microorganisms. It appears that these microorganisms
are secreted into the egg capsule while the squid is laying her
eggs. Preliminary studies have shown that these microorganisms
seem to provide some protection to the developing eggs from marine
pathogens by producing anti-microbial agents. Shewanella
pealeana was one of the members of this community. I am
interested in studying the physiology of this symbiotic microorganism.
Studies of how S. pealeana survives the environmental changes
of living within the squid and the free ocean, how it colonizes
the ANG, and its metabolism are in the works.
Ethanol
Production in Escherichia coli
I
am interested in elucidating the way in which the synthesis of ethanol
and related fermentation products are regulated in the facultative
anaerobe Escherichia coli. In particular, the expression
of the adhE gene, encoding the multifunctional alcohol dehydrogenase
(AdhE). AdhE, the key enzyme in fermentation, is being studied by
means of bacterial genetics and molecular biology. The adhR
gene, encoding a regulator that mediates the response of adhE
to the NADH level, has been shown to have NADH-dependent binding
to the adhE upstream region by gel retardation. In addition
to AdhR/NADH, the expression of the adhE gene also responds
to molybdenum levels. The effects on expression of adhE under
such conditions are being analyzed. The results should contribute
to our fundamental understanding of the genetic regulation of anaerobic
growth.
STUDENT
RESEARCHERS AND THEIR
CURRENT POSITIONS:
(2000-01) Julie Boerkel-Hall, Ph.D. in Genetics-Postdoctoral
Fellow @ National Institute of Environmental Health Sciences
(2000-01) Anne Rizza, M.A. in Forensic Science
(2000-02) Christopher Malozzi, D.O. - Resident @ University of South
Alabama Medical Center
(2001-02) Timothy Houser, D.D.S. - Private Practice
(2002-03) Courtney Knauss, M.D. -Resident @ Eastern Virginia Medical
Center
(2002-03) Jordan Bicher, DPT
(2004) Desirae Leipply, Ph.D. student @ Johns Hopkins University
in biophysics
(2005) Bradley Melhus, D.D.S. -Private practice
(2005) Lynette Wickman, Pharmacy student @ University of Iowa School
of Pharmacy
(2005-06, 2008) Patricia Davison, Ph.D. student in Cellular and
Molecular Biology @The Ohio State University
(2005-06) Brady Miller, MPH -ASPH/CDC Fellow @ Centers for Disease
Control and Prevention
(2006, 2008) Laura Steele, Ph.D. student @ the University of Illinois-Urbana/
Champaign in entomology
(2006) Bailey Clark, graduates in 2010
(2007) Jobin Abraham, MPH - Operations Manager @ Bayer HealthCare
(2007)
Alex Michaud, Ph.D. student in the IGERT program @ Montana State
University in microbial ecology
(2007)
Clarissa Thomas, graduates in 2011
(2008-09) Anni
Arcand, graduates in 2011
(2009) Reshica
Baral, graduates in 2011
(2009) Kailin
Breitbach, graduates in 2011
(2009) Cassie
Morgan, graduates in 2011
(2009) Peter
Miller, graduates in 2013
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